Compare EndNote, F1000 Workspace, Mendeley, Zotero: At a Glance
Reference Citation Managers
EndNote, F1000 Workspace, Mendeley, and Zotero are tools that serve the same purpose. They all allow you to create a database of references that you can use to keep track of your reading and to create references when you write. So how do you choose which one to use?
Basically, think about your needs and decide on your priorities. Possible priorities:
Cost: There is no cost to start using EndNote Basic, F1000 Workspace, Mendeley, or Zotero.
Working without internet access: You can use the references stored in EndNote, Mendeley or Zotero without being connected to the Internet. This feature is coming soon from F1000.
Storing PDFs: EndNote, F1000 Workspace, Mendeley, or Zotero allow you to integrate downloaded PDFs with your reference database. EndNote will search for available full-text when you are on campus and this is a very quick way to download and organize the full-text of multiple recent references.
Working with a team: If you are joining an established team that has already chosen a particular reference management tool, it is a good idea to learn to use that tool. If you are just forming a team, look at the sharing features in F1000 Workspace, Mendeley, and Zotero.
Systematic Reviews: HSL librarians prefer EndNote Desktop or F1000 Workspace for systematic reviews. Both allow ingestion of large result files from multiple databases and provide deduplication options.
See the PDF below for a more detailed comparison of EndNote Basic, EndNote Desktop + Basic, F1000 Workspace, and Mendeley, including application to four use cases (Public Health Graduate Students, Medical Residents, Research Lab Team, Systematic Review Team)